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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "tidySpatialExperiment" in publications use:'
type: software
license: GPL-3.0-or-later
title: 'tidySpatialExperiment: SpatialExperiment with tidy principles'
version: 1.1.4
doi: 10.1038/s41592-024-02299-2
abstract: tidySpatialExperiment provides a bridge between the SpatialExperiment package
  and the tidyverse ecosystem. It creates an invisible layer that allows you to interact
  with a SpatialExperiment object as if it were a tibble; enabling the use of functions
  from dplyr, tidyr, ggplot2 and plotly. But, underneath, your data remains a SpatialExperiment
  object.
authors:
- family-names: Hutchison
  given-names: William
  email: hutchison.w@wehi.edu.au
  orcid: https://orcid.org/0009-0001-6242-4269
- family-names: Mangiola
  given-names: Stefano
  email: mangiolastefano@gmail.com
preferred-citation:
  type: article
  title: 'The tidyomics ecosystem: enhancing omic data analyses'
  authors:
  - family-names: Hutchison
    given-names: William J.
  - family-names: Keyes
    given-names: Timothy J.
  - family-names: Consortium
    given-names: The tidyomics
  - family-names: Crowell
    given-names: Helena L.
  - family-names: Serizay
    given-names: Jacques
  - family-names: Soneson
    given-names: Charlotte
  - family-names: Davis
    given-names: Eric S.
  - family-names: Sato
    given-names: Noriaki
  - family-names: Moses
    given-names: Lambda
  - family-names: Tarlinton
    given-names: Boyd
  - family-names: Nahid
    given-names: Abdullah A.
  - family-names: Kosmac
    given-names: Miha
  - family-names: Clayssen
    given-names: Quentin
  - family-names: Yuan
    given-names: Victor
  - family-names: Mu
    given-names: Wancen
  - family-names: Park
    given-names: Ji-Eun
  - family-names: Mamede
    given-names: Izabela
  - family-names: Ryu
    given-names: Min Hyung
  - family-names: Axisa
    given-names: Pierre-Paul
  - family-names: Paiz
    given-names: Paulina
  - family-names: Poon
    given-names: Chi-Lam
  - family-names: Tang
    given-names: Ming
  - family-names: Gottardo
    given-names: Raphael
  - family-names: Morgan
    given-names: Martin
  - family-names: Lee
    given-names: Stuart
  - family-names: Lawrence
    given-names: Michael
  - family-names: Hicks
    given-names: Stephanie C.
  - family-names: Nolan
    given-names: Garry P.
  - family-names: Davis
    given-names: Kara L.
  - family-names: Papenfuss
    given-names: Anthony T.
  - family-names: Love
    given-names: Michael I.
  - family-names: Mangiola
    given-names: Stefano
    email: mangiolastefano@gmail.com
  journal: Nature Methods
  year: '2024'
  volume: '21'
  issue: '7'
  doi: 10.1038/s41592-024-02299-2
  start: 1166–1170
repository: https://bioc.r-universe.dev
repository-code: https://github.com/william-hutchison/tidySpatialExperiment
url: https://william-hutchison.github.io/tidySpatialExperiment/
contact:
- family-names: Hutchison
  given-names: William
  email: hutchison.w@wehi.edu.au
  orcid: https://orcid.org/0009-0001-6242-4269