Package: target
Type: Package
Title: Predict Combined Function of Transcription Factors
Version: 1.27.0
Authors@R: person("Mahmoud", "Ahmed",
    email = "mahmoud.s.fahmy@students.kasralainy.edu.eg",
    role = c("aut", "cre"))
Description: Implement the BETA algorithm for infering direct target
        genes from DNA-binding and perturbation expression data Wang et
        al. (2013) <doi: 10.1038/nprot.2013.150>. Extend the algorithm
        to predict the combined function of two DNA-binding elements
        from comprable binding and expression data.
URL: https://github.com/MahShaaban/target
BugReports: https://github.com/MahShaaban/target/issues
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.6)
Imports: BiocGenerics, GenomicRanges, IRanges, matrixStats, methods,
        stats, graphics, shiny
Suggests: testthat (>= 2.1.0), knitr, rmarkdown, shinytest, shinyBS,
        covr
VignetteBuilder: knitr
RoxygenNote: 6.1.1
biocViews: Software, StatisticalMethod, Transcription
Config/pak/sysreqs: cmake make libuv1-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:51:10 UTC
RemoteUrl: https://github.com/bioc/target
RemoteRef: HEAD
RemoteSha: c38bdfe0e28c49e363ac734e4e24d6ab10f4d356
NeedsCompilation: no
Packaged: 2026-06-21 09:18:54 UTC; root
Author: Mahmoud Ahmed [aut, cre]
Maintainer: Mahmoud Ahmed <mahmoud.s.fahmy@students.kasralainy.edu.eg>