# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "tadar" in publications use:' type: software license: GPL-3.0-only title: 'tadar: Transcriptome Analysis of Differential Allelic Representation' version: 1.3.2 doi: 10.32614/CRAN.package.tadar abstract: This package provides functions to standardise the analysis of Differential Allelic Representation (DAR). DAR compromises the integrity of Differential Expression analysis results as it can bias expression, influencing the classification of genes (or transcripts) as being differentially expressed. DAR analysis results in an easy-to-interpret value between 0 and 1 for each genetic feature of interest, where 0 represents identical allelic representation and 1 represents complete diversity. This metric can be used to identify features prone to false-positive calls in Differential Expression analysis, and can be leveraged with statistical methods to alleviate the impact of such artefacts on RNA-seq data. authors: - family-names: Baer given-names: Lachlan email: baerlachlan@gmail.com orcid: https://orcid.org/0000-0001-5213-3401 - family-names: Pederson given-names: Stevie email: stephen.pederson.au@gmail.com orcid: https://orcid.org/0000-0001-8197-3303 repository: https://bioc.r-universe.dev repository-code: https://github.com/baerlachlan/tadar commit: 5463ae5ac278600a828138287fb3ed7cb5d7bb4e url: https://github.com/baerlachlan/tadar contact: - family-names: Baer given-names: Lachlan email: baerlachlan@gmail.com orcid: https://orcid.org/0000-0001-5213-3401