Package: tRNAscanImport
Title: Importing a tRNAscan-SE result file as GRanges object
Version: 1.33.0
Date: 2025-07-23
Authors@R: person("Felix G.M.", 
                  "Ernst", 
                  email = "felix.gm.ernst@outlook.com", 
                  role = c("aut", "cre"),
                  comment = c(ORCID = "0000-0001-5064-0928"))
Description: The package imports the result of tRNAscan-SE as a GRanges
        object.
License: GPL-3 + file LICENSE
Encoding: UTF-8
Depends: R (>= 3.5), GenomicRanges, tRNA
Imports: methods, stringr, BiocGenerics, Biostrings, Structstrings,
        S4Vectors, IRanges, XVector, Seqinfo, rtracklayer, BSgenome,
        Rsamtools
Collate: 'tRNAscanImport.R' 'AllGenerics.R' 'tRNAscanImport-checks.R'
        'tRNAscanImport-genome.R' 'tRNAscanImport-import.R' 'utils.R'
Suggests: BiocStyle, knitr, rmarkdown, testthat, ggplot2,
        BSgenome.Scerevisiae.UCSC.sacCer3
RoxygenNote: 7.1.1
VignetteBuilder: knitr
biocViews: Software, DataImport, WorkflowStep, Preprocessing,
        Visualization
BugReports: https://github.com/FelixErnst/tRNAscanImport/issues
URL: https://github.com/FelixErnst/tRNAscanImport
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:47:24 UTC
RemoteUrl: https://github.com/bioc/tRNAscanImport
RemoteRef: HEAD
RemoteSha: 8cd93b41824625664266799346df78c18af0e40b
NeedsCompilation: no
Packaged: 2026-07-02 07:17:50 UTC; root
Author: Felix G.M. Ernst [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-5064-0928>)
Maintainer: Felix G.M. Ernst <felix.gm.ernst@outlook.com>