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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "systemPipeRdata" in publications use:'
type: software
license: Artistic-2.0
title: 'systemPipeRdata: systemPipeRdata: Workflow templates and sample data'
version: 2.17.1
doi: 10.1093/nargab/lqag032
identifiers:
- type: doi
  value: 10.32614/CRAN.package.systemPipeRdata
abstract: systemPipeRdata complements the systemPipeR workflow management system (WMS)
  by offering a collection of pre-designed data analysis workflow templates. These
  templates are easily accessible and can be readily loaded onto a user's system with
  a single command. Once loaded, the WMS can immediately utilize these templates for
  efficient end-to-end analysis, serving a wide range of data analysis needs.
authors:
- family-names: Girke
  given-names: Thomas
  email: thomas.girke@ucr.edu
preferred-citation:
  type: article
  title: 'systemPipeR: a multipurpose workflow management system for reproducible
    data analysis'
  authors:
  - family-names: Zhang
    given-names: Le
  - family-names: Cassol
    given-names: Daniela
  - family-names: Gongol
    given-names: Brendan
  - family-names: Girke
    given-names: Thomas
    email: thomas.girke@ucr.edu
  journal: NAR Genomics and Bioinformatics
  year: '2026'
  volume: '8'
  issue: '2'
  doi: 10.1093/nargab/lqag032
  url: https://doi.org/10.1093/nargab/lqag032
  start: lqag032
repository: https://bioc.r-universe.dev
repository-code: https://github.com/tgirke/systemPipeRdata
commit: 2193a9b6c18b93c3dcf444d4bef84c4ce4d83a60
url: https://github.com/tgirke/systemPipeRdata
date-released: '2026-09-26'
contact:
- family-names: Girke
  given-names: Thomas
  email: thomas.girke@ucr.edu