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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "synergyfinder" in publications use:'
type: software
license: MPL-2.0
title: 'synergyfinder: Calculate and Visualize Synergy Scores for Drug Combinations'
version: 3.13.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.synergyfinder
abstract: Efficient implementations for analyzing pre-clinical multiple drug combination
  datasets. It provides efficient implementations for 1.the popular synergy scoring
  models, including HSA, Loewe, Bliss, and ZIP to quantify the degree of drug combination
  synergy; 2. higher order drug combination data analysis and synergy landscape visualization
  for unlimited number of drugs in a combination; 3. statistical analysis of drug
  combination synergy and sensitivity with confidence intervals and p-values; 4. synergy
  barometer for harmonizing multiple synergy scoring methods to provide a consensus
  metric of synergy; 5. evaluation of synergy and sensitivity simultaneously to provide
  an unbiased interpretation of the clinical potential of the drug combinations. Based
  on this package, we also provide a web application (http://www.synergyfinder.org)
  for users who prefer graphical user interface.
authors:
- family-names: Zheng
  given-names: Shuyu
  email: shuyu.zheng@helsinki.fi
- family-names: Tang
  given-names: Jing
  email: jing.tang@helsinki.fi
preferred-citation:
  type: article
  title: 'SynergyFinder Plus: Toward Better Interpretation and Annotation of Drug
    Combination Screening Datasets'
  authors:
  - family-names: Zheng
    given-names: Shuyu
    email: shuyu.zheng@helsinki.fi
  - family-names: Wang
    given-names: Wenyu
  - family-names: Aldahdooh
    given-names: Jehad
  - family-names: Malyutina
    given-names: Alina
  - family-names: Shadbahr
    given-names: Tolou
  - family-names: Tanoli
    given-names: Ziaurrehman
  - family-names: Pessia
    given-names: Alberto
  - family-names: Tang
    given-names: Jing
    email: jing.tang@helsinki.fi
  journal: Genomics, Proteomics & Bioinformatics
  year: '2022'
  url: https://doi.org/10.1016/j.gpb.2022.01.004
  start: 20(3):587-596
repository: https://bioc.r-universe.dev
commit: 98b379022a4abe1e395de9f6608914484d9cca33
url: http://www.synergyfinder.org
date-released: '2024-01-22'
contact:
- family-names: Zheng
  given-names: Shuyu
  email: shuyu.zheng@helsinki.fi