# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "synapter" in publications use:'
type: software
license: GPL-2.0-only
title: 'synapter: Label-free data analysis pipeline for optimal identification and
  quantitation'
version: 2.29.0
identifiers:
- type: doi
  value: 10.32614/CRAN.package.synapter
abstract: The synapter package provides functionality to reanalyse label-free proteomics
  data acquired on a Synapt G2 mass spectrometer. One or several runs, possibly processed
  with additional ion mobility separation to increase identification accuracy can
  be combined to other quantitation files to maximise identification and quantitation
  accuracy.
authors:
- family-names: Gatto
  given-names: Laurent
  email: laurent.gatto@uclouvain.be
- family-names: Bond
  given-names: Nick J.
- family-names: Shliaha
  given-names: Pavel V.
- family-names: Gibb
  given-names: Sebastian
  email: mail@sebastiangibb.de
preferred-citation:
  type: article
  title: Improving qualitative and quantitative performance for MSE-based label free
    proteomics
  authors:
  - family-names: Bond
    given-names: Nicholas J.
  - family-names: Shliaha
    given-names: Pavel V.
  - family-names: Lilley
    given-names: Kathryn S.
  - family-names: Gatto
    given-names: Laurent
    email: laurent.gatto@uclouvain.be
  journal: Journal of Proteome Research
  volume: '12'
  issue: '6'
  year: '2013'
  url: http://pubs.acs.org/doi/abs/10.1021/pr300776t
repository: https://bioc.r-universe.dev
commit: 57f1bcbb5b7436556859ea2b2aed35b53c445365
url: https://lgatto.github.io/synapter/
contact:
- family-names: Gatto
  given-names: Laurent
  email: laurent.gatto@uclouvain.be
- family-names: Gibb
  given-names: Sebastian
  email: mail@sebastiangibb.de
references:
- type: article
  title: The Effects of Travelling Wave Ion Mobility Separation on Data Independent
    Acquisition in Proteomics Studies
  authors:
  - family-names: Shliaha
    given-names: Pavel V.
  - family-names: Bond
    given-names: Nicholas J.
  - family-names: Gatto
    given-names: Laurent
  - family-names: Lilley
    given-names: Kathryn S.
  journal: Journal of Proteome Research
  volume: '12'
  issue: '6'
  year: '2013'
  url: http://pubs.acs.org/doi/abs/10.1021/pr300775k