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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "svaRetro" in publications use:'
type: software
license: GPL-3.0-only
title: 'svaRetro: Retrotransposed transcript detection from structural variants'
version: 1.11.0
abstract: svaRetro contains functions for detecting retrotransposed transcripts (RTs)
  from structural variant calls. It takes structural variant calls in GRanges of breakend
  notation and identifies RTs by exon-exon junctions and insertion sites. The candidate
  RTs are reported by events and annotated with information of the inserted transcripts.
authors:
- family-names: Dong
  given-names: Ruining
  email: lnyidrn@gmail.com
  orcid: https://orcid.org/0000-0003-1433-0484
repository: https://bioc.r-universe.dev
repository-code: https://github.com/PapenfussLab/svaRetro
url: https://github.com/PapenfussLab/svaRetro
date-released: '2022-02-10'
contact:
- family-names: Dong
  given-names: Ruining
  email: lnyidrn@gmail.com
  orcid: https://orcid.org/0000-0003-1433-0484