NEWS

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speckle 0.99.7

• Added convertDataToList() to allow propeller to work with any proportions data
• Added unit tests
• Added minor changes for Bioconductor submission
• Update vignette to include example of analysing proportions data directly

speckle 0.99.0

• remove classifySex functions in preparation for submission to Bioconductor
• speckle only contains propeller functions

speckle 0.0.3

• Added functions to classify cells as male or female
• Change propeller transform default to logit

speckle 0.0.2

• Added functions to plot the mean variance relationship of the cell type counts and proportions
• Added functions to estimate parameters of a Beta distribution
• Added logit transformation option to propeller

speckle 0.0.1

• First version of the speckle package contains propeller functions to test for differences in cell type composition between groups of samples in single cell RNA-Seq data