To cite spatzie in publications use:

  spatzie: An R package for identifying significant transcription
  factor motif co-enrichment from enhancer-promoter interactions
  Jennifer Hammelman, Konstantin Krismer, David K. Gifford Nucleic
  Acids Research, 2022, gkac036; DOI:
  https://doi.org/10.1093/nar/gkac036

A BibTeX entry for LaTeX users is

  @Article{,
    title = {spatzie: An R package for identifying significant transcription factor motif co-enrichment from enhancer-promoter interactions},
    author = {Jennifer Hammelman and Konstanin Krismer and David K. Gifford},
    journal = {Nucleic Acids Research},
    pages = {gkac036},
    year = {2022},
    month = {1},
    doi = {10.1093/nar/gkac036},
    url = {https://doi.org/10.1093/nar/gkac036},
    publisher = {Oxford University Press},
  }

This free open-source software implements academic research by the
authors and co-workers. If you use it, please support the project by
citing the appropriate article.