Poličar P, Stražar M, Zupan B (2019). “openTSNE: a modular Python library for t-SNE dimensionality reduction and embedding.” bioRxiv. doi:10.1101/731877. https://www.biorxiv.org/content/early/2019/08/13/731877.full.pdf, https://www.biorxiv.org/content/early/2019/08/13/731877.

Linderman G, Rachh M, Hoskins J, Steinerberger S, Kluger Y (2019). “Fast interpolation-based t-SNE for improved visualization of single-cell RNA-seq data.” Nature Methods. doi:10.1038/s41592-018-0308-4. https://www.nature.com/articles/s41592-018-0308-4.

van der Maaten L (2014). “Accelerating t-SNE using Tree-Based Algorithms.” Journal of Machine Learning Research, 15(93), 3221-3245. http://jmlr.org/papers/v15/vandermaaten14a.html.

Corresponding BibTeX entries:

  @Article{,
    author = {Pavlin G. {Poli{\v c}ar} and Martin {Stra{\v z}ar} and
      Bla{\v z} Zupan},
    title = {openTSNE: a modular Python library for t-SNE
      dimensionality reduction and embedding},
    year = {2019},
    doi = {10.1101/731877},
    publisher = {Cold Spring Harbor Laboratory},
    url = {https://www.biorxiv.org/content/early/2019/08/13/731877},
    eprint =
      {https://www.biorxiv.org/content/early/2019/08/13/731877.full.pdf},
    journal = {bioRxiv},
  }

  @Article{,
    author = {George C. Linderman and Manas Rachh and Jeremy G. Hoskins
      and Stefan Steinerberger and Yuval Kluger},
    title = {Fast interpolation-based t-SNE for improved visualization
      of single-cell RNA-seq data},
    year = {2019},
    doi = {10.1038/s41592-018-0308-4},
    url = {https://www.nature.com/articles/s41592-018-0308-4},
    journal = {Nature Methods},
  }

  @Article{,
    author = {Laurens {van der Maaten}},
    title = {Accelerating t-SNE using Tree-Based Algorithms},
    journal = {Journal of Machine Learning Research},
    year = {2014},
    volume = {15},
    number = {93},
    pages = {3221-3245},
    url = {http://jmlr.org/papers/v15/vandermaaten14a.html},
  }