Package: sketchR
Version: 1.9.1
Date: 2026-04-02
Title: An R interface for python subsampling/sketching algorithms
Authors@R: c(
    person("Charlotte", "Soneson", email = "charlottesoneson@gmail.com",
        role = c("aut", "cre"), comment = c(ORCID = "0000-0003-3833-2169")),
    person("Michael", "Stadler", email = "michael.stadler@fmi.ch",
           role = "aut", comment = c(ORCID = "0000-0002-2269-4934")),
    person("Friedrich Miescher Institute for Biomedical Research", 
           role = "cph"))
License: MIT + file LICENSE
Description: Provides an R interface for various subsampling algorithms
        implemented in python packages. Currently, interfaces to the
        geosketch and scSampler python packages are implemented. In
        addition it also provides diagnostic plots to evaluate the
        subsampling.
Imports: basilisk, Biobase, DelayedArray, dplyr, ggplot2, methods,
        reticulate, rlang, scales, stats
Suggests: rmarkdown, knitr, testthat (>= 3.0.0), TENxPBMCData, scuttle,
        scater, SingleR, celldex, cowplot, SummarizedExperiment,
        beachmat.hdf5, BiocStyle, BiocManager, SingleCellExperiment,
        snifter, uwot, bluster, class, scrapper
URL: https://github.com/fmicompbio/sketchR
BugReports: https://github.com/fmicompbio/sketchR/issues
Encoding: UTF-8
StagedInstall: no
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: SingleCell
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libpng-dev python3 zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-05-14 09:12:48 UTC
RemoteUrl: https://github.com/bioc/sketchR
RemoteRef: HEAD
RemoteSha: f1e060bd60002c47e6e326ac314d62a4315fd2c3
NeedsCompilation: no
Packaged: 2026-06-13 07:50:04 UTC; root
Author: Charlotte Soneson [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-3833-2169>),
  Michael Stadler [aut] (ORCID: <https://orcid.org/0000-0002-2269-4934>),
  Friedrich Miescher Institute for Biomedical Research [cph]
Maintainer: Charlotte Soneson <charlottesoneson@gmail.com>