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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "singscore" in publications use:'
type: software
license: GPL-3.0-only
title: 'singscore: Rank-based single-sample gene set scoring method'
version: 1.25.0
doi: http://doi.org/10.1186/s12859-018-2435-4
identifiers:
- type: doi
  value: 10.32614/CRAN.package.singscore
abstract: A simple single-sample gene signature scoring method that uses rank-based
  statistics to analyze the sample's gene expression profile. It scores the expression
  activities of gene sets at a single-sample level.
authors:
- family-names: Bhuva
  given-names: Dharmesh D.
  email: bhuva.d@wehi.edu.au
  orcid: https://orcid.org/0000-0002-6398-9157
- family-names: Lyu
  given-names: Ruqian
  email: ruqianl@student.unimelb.edu.au
- family-names: Foroutan
  given-names: Momeneh
  email: foroutan.m@wehi.edu.au
  orcid: https://orcid.org/0000-0002-1440-0457
- family-names: Kharbanda
  given-names: Malvika
  email: kharbanda.m@wehi.edu.au
  orcid: https://orcid.org/0000-0001-9726-3023
preferred-citation:
  type: article
  title: Single sample scoring of molecular phenotypes
  authors:
  - family-names: Foroutan
    given-names: Momeneh
    email: foroutan.m@wehi.edu.au
    orcid: https://orcid.org/0000-0002-1440-0457
  - family-names: Bhuva
    given-names: Dharmesh D.
    email: bhuva.d@wehi.edu.au
    orcid: https://orcid.org/0000-0002-6398-9157
  - family-names: Lyu
    given-names: Ruqian
    email: ruqianl@student.unimelb.edu.au
  - family-names: Horan
    given-names: Kristy
  - family-names: Cursons
    given-names: Joseph
  - family-names: Davis
    given-names: Melissa J.
  journal: BMC bioinformatics
  volume: '19'
  issue: '1'
  year: '2018'
  publisher:
    name: BioMed Central
  doi: http://doi.org/10.1186/s12859-018-2435-4
  start: '404'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/DavisLaboratory/singscore
commit: 7eeaa470aa0bc526c9870c82a71d21d43e0b0fa1
url: https://davislaboratory.github.io/singscore
contact:
- family-names: Kharbanda
  given-names: Malvika
  email: kharbanda.m@wehi.edu.au
  orcid: https://orcid.org/0000-0001-9726-3023
references:
- type: article
  title: Stable gene expression for normalisation and single-sample scoring
  authors:
  - family-names: Bhuva
    given-names: Dharmesh D.
  - family-names: Cursons
    given-names: Joseph
  - family-names: Davis
    given-names: Melissa J.
  journal: Nucleic Acids Research
  volume: '48'
  issue: '19'
  year: '2020'
  publisher:
    name: Oxford University Press
  doi: 10.1093/nar/gkaa802
  start: e113