Package: simpleSingleCell
Title: A step-by-step workflow for low-level analysis of single-cell
        RNA-seq data with Bioconductor
Version: 1.37.0
Date: 2020-08-23
Authors@R: c(person(role=c("aut", "cre"), "Aaron", "Lun", email = "infinite.monkeys.with.keyboards@gmail.com"),
        person(role="aut", "Davis", "McCarthy"),
        person(role="aut", "John", "Marioni"))
Description: Once a proud workflow package, this is now a shell of its
        former self. Almost all of its content has been cannibalized
        for use in the "Orchestrating Single-Cell Analyses with
        Bioconductor" book at https://osca.bioconductor.org. Most
        vignettes here are retained as reminders of the glory that once
        was, also providing redirection for existing external links to
        the relevant OSCA book chapters.
Imports: utils, methods, knitr, callr, rmarkdown, CodeDepends,
        BiocStyle
Suggests: readxl, R.utils, SingleCellExperiment, scater, scran, limma,
        BiocFileCache, org.Mm.eg.db
License: Artistic-2.0
Encoding: UTF-8
VignetteBuilder: knitr
biocViews: ImmunoOncologyWorkflow, Workflow, SingleCellWorkflow
Workflow: True
NeedsCompilation: no
URL: https://www.bioconductor.org/help/workflows/simpleSingleCell/
RoxygenNote: 7.1.0
Config/pak/sysreqs: cmake make libuv1-dev libxml2-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:43:17 UTC
RemoteUrl: https://github.com/bioc/simpleSingleCell
RemoteRef: HEAD
RemoteSha: 9ca00eba24c8731e80d600546e0d0d0c9004bb32
Packaged: 2026-10-01 15:37:18 UTC; root
Author: Aaron Lun [aut, cre],
  Davis McCarthy [aut],
  John Marioni [aut]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>