To cite signifinder in publications use:

Pirrotta S, Masatti L, Bortolato A, Corrà A, Pedrini F, Aere M, Esposito G, Martini P, Risso D, Romualdi C, Calura E. Exploring public cancer gene expression signatures across bulk, single-cell and spatial transcriptomics data with signifinder Bioconductor package. NAR Genom Bioinform. 2024 Oct 3;6(4):lqae138.<doi:10.1093/nargab/lqae138>. PMID: 39363890; PMCID: PMC11447528.

Corresponding BibTeX entry:

  @Article{,
    title = {Exploring public cancer gene expression signatures across
      bulk, single-cell and spatial transcriptomics data with
      signifinder Bioconductor package},
    author = {Stefania Pirrotta and Laura Masatti and Anna Bortolato
      and Anna Corrà and Fabiola Pedrini and Martina Aere and Giovanni
      Esposito and Paolo Martini and Davide Risso and Chiara Romualdi
      and Enrica Calura},
    journal = {NAR Genom Bioinform},
    year = {2024},
    url = {https://doi.org/10.1093/nargab/lqae138},
  }