Package: sfi
Type: Package
Title: Data analysis for Single File Injections (SFIs) mode LC-MS
        analysis
Version: 1.1.0
Authors@R: person(given = "Miao", family = "YU",
        role = c("aut", "cre"), 
        email = "yufreecas@gmail.com",
        comment = c(ORCID = "0000-0002-2804-6014"))
Description: Data analysis for Single File Injections(SFIs) mode LC-MS
        analysis. In SFIs mode, pooled samples are initially injected
        to serve as reference peaks for subsequent analyses. Repeated
        injections of individual samples are then performed at fixed
        time intervals using isocratic elution. This package provides
        the functions to analyze data from SFIs mode including peak
        picking and peak reassignment.
URL: https://github.com/yufree/sfi
BugReports: https://github.com/yufree/sfi/issues/new
License: MIT + file LICENSE
Depends: R (>= 4.5.0)
LinkingTo: Rcpp
Imports: Rcpp, enviGCMS, stats, RaMS, rmarkdown, methods,
        SummarizedExperiment, S4Vectors
Suggests: knitr, data.table, BiocStyle, ggplot2, MsCoreUtils, testthat
        (>= 3.0.0)
Config/testthat/edition: 3
VignetteBuilder: knitr
biocViews: MassSpectrometry, Metabolomics, FeatureExtraction
Encoding: UTF-8
RoxygenNote: 7.3.3
LazyData: false
Config/pak/sysreqs: cmake libglpk-dev make libmagick++-dev gsfonts
        texlive libicu-dev libuv1-dev libxml2-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-11 15:05:06 UTC
RemoteUrl: https://github.com/bioc/sfi
RemoteRef: HEAD
RemoteSha: d5173128149a47e379d4d521b7661d3949f52e87
NeedsCompilation: yes
Packaged: 2026-07-11 09:10:33 UTC; root
Author: Miao YU [aut, cre] (ORCID: <https://orcid.org/0000-0002-2804-6014>)
Maintainer: Miao YU <yufreecas@gmail.com>