To cite package ‘scruff’ in publications use:

Wang Z, Hu J, Campbell J (2026). scruff: Single Cell RNA-Seq UMI Filtering Facilitator (scruff). R package version 1.31.0, https://bioconductor.org/packages/scruff.

Corresponding BibTeX entry:

  @Manual{,
    title = {scruff: Single Cell RNA-Seq UMI Filtering Facilitator
      (scruff)},
    author = {Zhe Wang and Junming Hu and Joshua Campbell},
    year = {2026},
    note = {R package version 1.31.0},
    url = {https://bioconductor.org/packages/scruff},
  }