Added the aggregateAcrossGenes()
function, to compute an aggregate expression value for gene sets.
Added compute.cohens.d=
, compute.delta.mean=
and compute.delta.detected=
options to scoreMarkers()
.
Support top=Inf
in chooseHighlyVariableGenes()
.
Also added the bound=
argument to set a hard upper/lower bound.
Bugfix for correct filtering with block=
in the various filter*QcMetrics()
functions when not all blocking levels are present.
Bugfix to clusterKmeans()
to respect the user-supplied seed=
in relevant initialization methods.