NEWS

---

scifer 1.8.0

NEW FEATURES

scifer 1.7.1 (2024-04-24)

BUG FIXES

• Fix compensation bug due to different compensation matrix positions in different .fcs file versions
• update minor nomenclature to AIRR-standards, column file_ID to sequence_id
• Fix error of HC_individualized_report.Rmd file not being found

NEW FEATURES

• Update quality thresholds based on a large B cell receptor test dataset

scifer 0.99.4 (2022-10-31)

• Version bump to bioconductor, updated description

scifer 0.99.3 (2022-09-20)

BUG FIXES

• Fix NOTE when building on windows computer

scifer 0.99.2 (2022-09-08)

NEW FEATURES

• Update vignette according to Bioconductor
• Added unit tests for functions

SIGNIFICANT USER-VISIBLE CHANGES

• Split function fcs_processing() into two functions:
  • fcs_processing()
  • fcs_plot()

BUG FIXES

• Minor changes to avoid possible bugs

scifer 0.99.1 (2022-08-26)

• Version bump to fix Bioconductor building error

scifer 0.99.0 (2022-08-10)

• Adapting package for Bioconductor submission

scifer 0.98.0 (2022-08-09)

• Major changes in functions
  • nomenclature and all documentation were added following R style guidelines
  • Processing flow cytometry data and adding to the quality_report() function

scifer 0.1.0 (2022-04-15)

• Submitted to GitHub

scifer 0.0.1 (2020-08-10)

• Primordial package created with simple functions and bugs