Package: scPassport
Title: Passport System for Single-Cell Objects
Version: 1.1.0
Authors@R: 
    person("Sedat", "Kacar",
           email = "sedatkacar56@gmail.com",
           role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-0671-8529"))
Description: Stamps Seurat, SingleCellExperiment, and
        SummarizedExperiment objects with a persistent metadata
        passport. For Seurat objects the passport is stored in the misc
        slot; for SingleCellExperiment and SummarizedExperiment objects
        it is stored in the metadata slot. Tracks animal info,
        experiment details, lineage (parent/child relationships), RDS
        registry numbers, processing logs, and custom fields. Includes
        an interactive Shiny gadget to fill and update the passport,
        and a read mode to print the full passport to console. The
        passport persists inside the RDS file with no external files
        needed.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends: R (>= 4.3)
Imports: shiny, miniUI, Rcpp, S4Vectors
LinkingTo: Rcpp
Suggests: Seurat, SingleCellExperiment, SummarizedExperiment, knitr,
        rmarkdown, testthat (>= 3.0.0)
biocViews: SingleCell, DataImport, Visualization, Infrastructure
VignetteBuilder: knitr
Config/testthat/edition: 3
BugReports: https://github.com/sedatkacar56/scPassport/issues
URL: https://github.com/sedatkacar56/scPassport
Config/pak/sysreqs: cmake make libuv1-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 13:06:46 UTC
RemoteUrl: https://github.com/bioc/scPassport
RemoteRef: HEAD
RemoteSha: b4e92ef543eb8123f0086dcad523c4c3d06afb54
NeedsCompilation: yes
Packaged: 2026-05-30 09:51:30 UTC; root
Author: Sedat Kacar [aut, cre] (ORCID: <https://orcid.org/0000-0002-0671-8529>)
Maintainer: Sedat Kacar <sedatkacar56@gmail.com>