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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "scLANE" in publications use:'
type: software
license: MIT
title: 'scLANE: Model Gene Expression Dynamics with Spline-Based NB GLMs, GEEs, &
  GLMMs'
version: 1.3.0
doi: 10.1101/2023.12.19.572477
identifiers:
- type: doi
  value: 10.32614/CRAN.package.scLANE
abstract: Our scLANE model uses truncated power basis spline models to build flexible,
  interpretable models of single cell gene expression over pseudotime or latent time.
  The modeling architectures currently supported are Negative-binomial GLMs, GEEs,
  & GLMMs. Downstream analysis functionalities include model comparison, dynamic gene
  clustering, smoothed counts generation, gene set enrichment testing, & visualization.
authors:
- family-names: Leary
  given-names: Jack R.
  email: j.leary@ufl.edu
  orcid: https://orcid.org/0009-0004-8821-3269
preferred-citation:
  type: article
  title: Interpretable trajectory inference with single-cell Linear Adaptive Negative-binomial
    Expression (scLANE) testing
  authors:
  - family-names: Leary
    given-names: Jack R.
    email: j.leary@ufl.edu
    orcid: https://orcid.org/0009-0004-8821-3269
  - family-names: Bacher
    given-names: Rhonda
  journal: BioRxiv
  year: '2023'
  doi: 10.1101/2023.12.19.572477
repository: https://bioc.r-universe.dev
repository-code: https://github.com/jr-leary7/scLANE
commit: cebd51128722b996a42333391c18dc4036fceed7
url: https://github.com/jr-leary7/scLANE
date-released: '2026-04-28'
contact:
- family-names: Leary
  given-names: Jack R.
  email: j.leary@ufl.edu
  orcid: https://orcid.org/0009-0004-8821-3269