Changes in version 0.99.3                        

Bug fixes

  - Improve overall stability.

                       Changes in version 0.99.2                        

Bug fixes

  - Improve overall stability.

                       Changes in version 0.99.1                        

Bug fixes

  - Updated R version dependency from 4.5.0 to 4.6.0 to match
    Bioconductor 3.23.
  - Replaced deprecated scuttle::perCellQCMetrics() usage with
    scrapper::computeRnaQcMetrics(), removing deprecation warnings from
    the test suite while preserving existing scBatchQC_* output column
    names.
  - Updated generated imports and dependency metadata for the new
    scrapper QC metric backend.

                       Changes in version 0.99.0                        

New features

  - Initial release submitted to Bioconductor.
  - batchAwareQCMetrics(): compute per-cell QC metrics with hierarchical
    empirical Bayes batch harmonization.
  - estimateBatchDoubletRate(): estimate per-batch doublet rates from
    cells-loaded metadata and protocol type.
  - harmonizeQCThresholds(): inspect and update QC thresholds at
    arbitrary MAD stringency without re-running the full pipeline.
  - plotBatchQC(): violin plot panel of QC metric distributions per
    batch with harmonized threshold overlays.
  - BQCResult S4 class for storing batch QC results.