Package: safe
Title: Significance Analysis of Function and Expression
Version: 3.53.1
Author: William T. Barry
Description: SAFE is a resampling-based method for testing functional
        categories in gene expression experiments. SAFE can be applied
        to 2-sample and multi-class comparisons, or simple linear
        regressions. Other experimental designs can also be
        accommodated through user-defined functions.
Depends: R (>= 2.4.0), AnnotationDbi, Biobase, methods, SparseM
Suggests: GO.db, PFAM.db, reactome.db, hgu133a.db, breastCancerUPP,
        survival, foreach, doRNG, Rgraphviz, GOstats
Maintainer: Ludwig Geistlinger <ludwig.geistlinger@gmail.com>
License: GPL (>= 2)
biocViews: DifferentialExpression, Pathways, GeneSetEnrichment,
        StatisticalMethod, Software
Config/pak/sysreqs: libpng-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-05-01 22:09:53 UTC
RemoteUrl: https://github.com/bioc/safe
RemoteRef: HEAD
RemoteSha: cbf9c648ab65aab6029e2dc45b92358b568ba8fa
NeedsCompilation: no
Packaged: 2026-07-04 17:55:33 UTC; root