# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rprimer" in publications use:'
type: software
license: GPL-3.0-only
title: 'rprimer: Design Degenerate Oligos from a Multiple DNA Sequence Alignment'
version: 1.9.0
abstract: Functions, workflow, and a Shiny application for visualizing sequence conservation
  and designing degenerate primers, probes, and (RT)-(q/d)PCR assays from a multiple
  DNA sequence alignment. The results can be presented in data frame format and visualized
  as dashboard-like plots. For more information, please see the package vignette.
authors:
- family-names: Persson
  given-names: Sofia
  email: sofiapersson27@gmail.com
  orcid: https://orcid.org/0000-0003-2611-3030
preferred-citation:
  type: article
  title: 'rprimer: an R/bioconductor package for design of degenerate oligos for sequence
    variable viruses'
  authors:
  - family-names: Persson
    given-names: Sofia
    email: sofiapersson27@gmail.com
    orcid: https://orcid.org/0000-0003-2611-3030
  - family-names: Larsson
    given-names: Christina
  - family-names: Simonsson
    given-names: Magnus
  - family-names: Ellström
    given-names: Patrik
  journal: BMC Bioinformatics
  year: '2022'
  volume: '23'
  issue: '239'
  url: https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-022-04781-0
repository: https://bioc.r-universe.dev
repository-code: https://github.com/sofpn/rprimer
url: https://github.com/sofpn/rprimer
contact:
- family-names: Persson
  given-names: Sofia
  email: sofiapersson27@gmail.com
  orcid: https://orcid.org/0000-0003-2611-3030