Package: roar
Type: Package
Title: Identify differential APA usage from RNA-seq alignments
Version: 1.49.0
Date: 2016-03-21
Author: Elena Grassi
Maintainer: Elena Grassi <grassi.e@gmail.com>
Description: Identify preferential usage of APA sites, comparing two
        biological conditions, starting from known alternative sites
        and alignments obtained from standard RNA-seq experiments.
biocViews: Sequencing, HighThroughputSequencing, RNAseq, Transcription
License: GPL-3
Depends: R (>= 3.0.1)
Imports: methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges,
        SummarizedExperiment, GenomicAlignments (>= 0.99.4),
        rtracklayer, GenomeInfoDb
Suggests: RNAseqData.HNRNPC.bam.chr14, testthat
URL: https://github.com/vodkatad/roar/
Config/pak/sysreqs: make libbz2-dev liblzma-dev libxml2-dev libssl-dev
        xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:38:30 UTC
RemoteUrl: https://github.com/bioc/roar
RemoteRef: HEAD
RemoteSha: ea42a9ed2448f14c89582dd14e6bc9be5492bcb3
NeedsCompilation: no
Packaged: 2026-07-06 06:34:46 UTC; root