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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rnaseqcomp" in publications use:'
type: software
license: GPL-3.0-only
title: 'rnaseqcomp: Benchmarks for RNA-seq Quantification Pipelines'
version: 1.35.0
abstract: Several quantitative and visualized benchmarks for RNA-seq quantification
  pipelines. Two-condition quantifications for genes, transcripts, junctions or exons
  by each pipeline with necessary meta information should be organized into numeric
  matrices in order to proceed the evaluation.
authors:
- family-names: Teng
  given-names: Mingxiang
  email: tengmx@gmail.com
- family-names: Irizarry
  given-names: Rafael A.
preferred-citation:
  type: article
  title: A benchmark for RNA-seq quantification pipelines
  authors:
  - family-names: Teng
    given-names: Mingxiang
    email: tengmx@gmail.com
  - family-names: Love
    given-names: Michael I
  - family-names: Davis
    given-names: Carrie A
  - family-names: Djebali
    given-names: Sarah
  - family-names: Dobin
    given-names: Alexander
  - family-names: Graveley
    given-names: Brenton R
  - family-names: Li
    given-names: Sheng
  - family-names: Mason
    given-names: Christopher E
  - family-names: Olson
    given-names: Sara
  - family-names: Pervouchine
    given-names: Dmitri
  - family-names: Sloan
    given-names: Cricket A
  - family-names: Wei
    given-names: Xintao
  - family-names: Zhan
    given-names: Lijun
  - family-names: Irizarry
    given-names: Rafael A
  journal: Genome Biology
  volume: '17'
  issue: '1'
  year: '2016'
  start: '74'
repository: https://bioc.r-universe.dev
repository-code: https://github.com/tengmx/rnaseqcomp
url: https://github.com/tengmx/rnaseqcomp
contact:
- family-names: Teng
  given-names: Mingxiang
  email: tengmx@gmail.com