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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rnaSentry" in publications use:'
type: software
license: MIT
title: 'rnaSentry: Guarded and Auditable Discovery of Prognostic RNA-Seq Signatures'
version: 0.99.19
abstract: 'Orchestrates the statistical pipeline underlying prognostic biomarker discovery
  from bulk RNA-seq SummarizedExperiment objects: sample-identity and quality-control
  auditing, confounder and design-formula detection prior to differential expression,
  signature construction with explicit cross-validation stability reporting, survival
  modeling (Kaplan-Meier, log-rank, Cox proportional hazards), and external validation
  against public cohorts. Every automated statistical decision is reported with its
  supporting statistic and a plain-language rationale, and validation stages are gated
  rather than silently degraded when guardrail criteria are not met. The package records
  all guardrail decisions, flag ledgers, and validation results in a structured audit
  trail that can be rendered into a standalone HTML report.'
authors:
- family-names: Ghrieb
  given-names: Abdelkarim Hani
  email: ghriebabdelkarimhani@gmail.com
repository: https://bioc.r-universe.dev
repository-code: https://github.com/Ghrieb/rnaSentry
commit: d445c42b8e8e27d93769b0a7483f6c4ac7135c7b
url: https://ghrieb.github.io/rnaSentry/
date-released: '2026-10-01'
contact:
- family-names: Ghrieb
  given-names: Abdelkarim Hani
  email: ghriebabdelkarimhani@gmail.com