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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "rhinotypeR" in publications use:'
type: software
license: MIT
title: 'rhinotypeR: Rhinovirus genotyping'
version: 1.1.0
doi: 10.32614/CRAN.package.rhinotypeR
abstract: '"rhinotypeR" is designed to automate the comparison of sequence data against
  prototype strains, streamlining the genotype assignment process. By implementing
  predefined pairwise distance thresholds, this package makes genotype assignment
  accessible to researchers and public health professionals. This tool enhances our
  epidemiological toolkit by enabling more efficient surveillance and analysis of
  rhinoviruses (RVs) and other viral pathogens with complex genomic landscapes. Additionally,
  "rhinotypeR" supports comprehensive visualization and analysis of single nucleotide
  polymorphisms (SNPs) and amino acid substitutions, facilitating in-depth genetic
  and evolutionary studies.'
authors:
- family-names: Luka
  given-names: Martha
  email: marthaluka20@gmail.com
  orcid: https://orcid.org/0000-0001-6217-4426
- family-names: Nanjala
  given-names: Ruth
- family-names: Gatua
  given-names: Winfred
- family-names: Rashed
  given-names: Wafaa M.
- family-names: Awe
  given-names: Olaitan
repository: https://bioc.r-universe.dev
repository-code: https://github.com/omicscodeathon/rhinotypeR
commit: 4fd8c8848c5e7624fe54c2642f47ac9dc73fa4f2
url: https://github.com/omicscodeathon/rhinotypeR
date-released: '2024-10-03'
contact:
- family-names: Luka
  given-names: Martha
  email: marthaluka20@gmail.com
  orcid: https://orcid.org/0000-0001-6217-4426