To cite package ‘regionReport’ in publications use:

  Collado-Torres L, Jaffe AE, Leek JT (2016). “regionReport:
  Interactive reports for region-level and feature-level genomic
  analyses [version2; referees: 2 approved, 1 approved with
  reservations].” _F1000Research_, *4*, 105.
  doi:10.12688/f1000research.6379.2
  <https://doi.org/10.12688/f1000research.6379.2>,
  <http://f1000research.com/articles/4-105/v2>.

A BibTeX entry for LaTeX users is

  @Article{,
    author = {Leonardo Collado-Torres and Andrew E. Jaffe and Jeffrey T. Leek},
    title = {regionReport: Interactive reports for region-level and feature-level genomic analyses [version2; referees: 2 approved, 1 approved with reservations]},
    journal = {F1000Research},
    year = {2016},
    doi = {10.12688/f1000research.6379.2},
    url = {http://f1000research.com/articles/4-105/v2},
    volume = {4},
    pages = {105},
  }

  Collado-Torres L, Nellore A, Frazee AC, Wilks C, Love MI, Langmead B,
  Irizarry RA, Leek JT, Jaffe AE (2017). “Flexible expressed region
  analysis for RNA-seq with derfinder.” _Nucl. Acids Res._.
  doi:10.1093/nar/gkw852 <https://doi.org/10.1093/nar/gkw852>,
  <http://nar.oxfordjournals.org/content/early/2016/09/29/nar.gkw852>.

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Flexible expressed region analysis for RNA-seq with derfinder},
    author = {Leonardo Collado-Torres and Abhinav Nellore and Alyssa C. Frazee and Christopher Wilks and Michael I. Love and Ben Langmead and Rafael A. Irizarry and Jeffrey T. Leek and Andrew E. Jaffe},
    year = {2017},
    journal = {Nucl. Acids Res.},
    doi = {10.1093/nar/gkw852},
    url = {http://nar.oxfordjournals.org/content/early/2016/09/29/nar.gkw852},
  }

  Collado-Torres L, Jaffe AE, Leek JT (2017). _regionReport: Generate
  HTML or PDF reports for a set of genomic regions or DESeq2/edgeR
  results_. doi:10.18129/B9.bioc.regionReport
  <https://doi.org/10.18129/B9.bioc.regionReport>,
  https://github.com/leekgroup/regionReport - R package version 1.39.0,
  <http://www.bioconductor.org/packages/regionReport>.

A BibTeX entry for LaTeX users is

  @Manual{,
    title = {regionReport: Generate HTML or PDF reports for a set of genomic regions or DESeq2/edgeR results},
    author = {Leonardo Collado-Torres and Andrew E. Jaffe and Jeffrey T. Leek},
    year = {2017},
    url = {http://www.bioconductor.org/packages/regionReport},
    note = {https://github.com/leekgroup/regionReport - R package version 1.39.0},
    doi = {10.18129/B9.bioc.regionReport},
  }