The initial recountmethylation publication, including analyses of the initial HM450K compilation. Analyses from this study are reproduced in the Data Analyses vignette. This should be cited for recountmethylation versions earlier than 1.6.0: Maden SK, Thompson RF, Hansen KD, Nellore A (2021). “Human methylome variation across Infinium 450K on the Gene Expression Omnibus.” _NAR Genomics and Bioinformatics_, *3*(2), lqab025. doi:10.1093/nargab/lqab025 , . A BibTeX entry for LaTeX users is @Article{, title = {Human methylome variation across Infinium 450K on the Gene Expression Omnibus}, author = {Sean K. Maden and Reid F. Thompson and Kasper D. Hansen and Abhinav Nellore}, year = {2021}, number = {2}, volume = {3}, pages = {lqab025}, pubmed = {33937763}, journal = {NAR Genomics and Bioinformatics}, doi = {10.1093/nargab/lqab025}, url = {https://doi.org/10.1093/nargab/lqab025}, } The second recountmethylation paper includes analyses of public DNAm array data from blood, including samples run on the HM450K and EPIC platforms. It introduces updated compilations and vignettes, a Snakemake workflow, and a sample search index. This should be cited for recountmethylation version 1.6.0 and greater: Maden SK, Walsh B, Ellrott K, Hansen KD, Thompson RF, Nellore A (2022). “recountmethylation enables flexible analysis of public blood DNA methylation array data.” _bioRxiv_. doi:10.1101/2022.05.19.492680 , . A BibTeX entry for LaTeX users is @Article{, title = {recountmethylation enables flexible analysis of public blood {DNA} methylation array data}, author = {Sean K. Maden and Brian Walsh and Kyle Ellrott and Kasper D. Hansen and Reid F. Thompson and Abhinav Nellore}, year = {2022}, journal = {bioRxiv}, doi = {10.1101/2022.05.19.492680}, url = {https://www.biorxiv.org/content/10.1101/2022.05.19.492680v1}, }