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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "recount3" in publications use:'
type: software
license: Artistic-2.0
title: 'recount3: Explore and download data from the recount3 project'
version: 1.15.0
doi: 10.18129/B9.bioc.recount3
abstract: The recount3 package enables access to a large amount of uniformly processed
  RNA-seq data from human and mouse. You can download RangedSummarizedExperiment objects
  at the gene, exon or exon-exon junctions level with sample metadata and QC statistics.
  In addition we provide access to sample coverage BigWig files.
authors:
- family-names: Collado-Torres
  given-names: Leonardo
  email: lcolladotor@gmail.com
  orcid: https://orcid.org/0000-0003-2140-308X
preferred-citation:
  type: manual
  title: Explore and download data from the recount3 project
  authors:
  - family-names: Collado-Torres
    given-names: Leonardo
    email: lcolladotor@gmail.com
    orcid: https://orcid.org/0000-0003-2140-308X
  year: '2024'
  url: http://www.bioconductor.org/packages/recount3
  notes: https://github.com/LieberInstitute/recount3 - R package version 1.15.0
  doi: 10.18129/B9.bioc.recount3
repository: https://bioc.r-universe.dev
repository-code: https://github.com/LieberInstitute/recount3
url: https://github.com/LieberInstitute/recount3
date-released: '2023-05-06'
contact:
- family-names: Collado-Torres
  given-names: Leonardo
  email: lcolladotor@gmail.com
  orcid: https://orcid.org/0000-0003-2140-308X
references:
- type: article
  title: 'recount3: summaries and queries for large-scale RNA-seq expression and splicing'
  authors:
  - family-names: Wilks
    given-names: Christopher
  - family-names: Zheng
    given-names: Shijie C.
  - family-names: Chen
    given-names: Feng Yong
  - family-names: Charles
    given-names: Rone
  - family-names: Solomon
    given-names: Brad
  - family-names: Ling
    given-names: Jonathan P.
  - family-names: Imada
    given-names: Eddie Luidy
  - family-names: Zhang
    given-names: David
  - family-names: Joseph
    given-names: Lance
  - family-names: Leek
    given-names: Jeffrey T.
  - family-names: Jaffe
    given-names: Andrew E.
  - family-names: Nellore
    given-names: Abhinav
  - family-names: Collado-Torres
    given-names: Leonardo
  - family-names: Hansen
    given-names: Kasper D.
  - family-names: Langmead
    given-names: Ben
  year: '2021'
  journal: Genome Biol
  doi: 10.1186/s13059-021-02533-6
  url: https://doi.org/10.1186/s13059-021-02533-6