Package: recount3
Title: Explore and download data from the recount3 project
Version: 1.23.0
Date: 2026-03-31
Authors@R: 
    c(
    person("Leonardo", "Collado-Torres", role = c("aut", "cre"), 
    email = "lcolladotor@gmail.com", comment = c(ORCID = "0000-0003-2140-308X"))
    )
Description: The recount3 package enables access to a large amount of
        uniformly processed RNA-seq data from human and mouse. You can
        download RangedSummarizedExperiment objects at the gene, exon
        or exon-exon junctions level with sample metadata and QC
        statistics. In addition we provide access to sample coverage
        BigWig files.
License: Artistic-2.0
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
URL: https://github.com/LieberInstitute/recount3
BugReports: https://github.com/LieberInstitute/recount3/issues
biocViews: Coverage, DifferentialExpression, GeneExpression, RNASeq,
        Sequencing, Software, DataImport
Suggests: BiocStyle, covr, knitcitations, knitr, lobstr, RefManageR,
        rmarkdown, testthat, recount
VignetteBuilder: knitr
Depends: SummarizedExperiment
Imports: BiocFileCache, data.table, GenomicRanges, httr, Matrix,
        methods, R.utils, rtracklayer, S4Vectors, sessioninfo, tools,
        utils
Config/pak/sysreqs: make libbz2-dev libicu-dev liblzma-dev libxml2-dev
        libssl-dev xz-utils zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:54:03 UTC
RemoteUrl: https://github.com/bioc/recount3
RemoteRef: HEAD
RemoteSha: 454e04abfd55ca78fffb4a34eef6d6d7a8aea1f5
NeedsCompilation: no
Packaged: 2026-06-18 11:24:47 UTC; root
Author: Leonardo Collado-Torres [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-2140-308X>)
Maintainer: Leonardo Collado-Torres <lcolladotor@gmail.com>