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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "ramr" in publications use:'
type: software
license: Artistic-2.0
title: 'ramr: Detection of Rare Aberrantly Methylated Regions in Array and NGS Data'
version: 1.13.0
abstract: ramr is an R package for detection of low-frequency aberrant methylation
  events in large data sets obtained by methylation profiling using array or high-throughput
  bisulfite sequencing. In addition, package provides functions to visualize found
  aberrantly methylated regions (AMRs), to generate sets of all possible regions to
  be used as reference sets for enrichment analysis, and to generate biologically
  relevant test data sets for performance evaluation of AMR/DMR search algorithms.
authors:
- family-names: Nikolaienko
  given-names: Oleksii
  email: oleksii.nikolaienko@gmail.com
  orcid: https://orcid.org/0000-0002-5910-4934
preferred-citation:
  type: article
  title: 'ramr: an R/Bioconductor package for detection of rare aberrantly methylated
    regions'
  authors:
  - family-names: Nikolaienko
    given-names: Oleksii
    email: oleksii.nikolaienko@gmail.com
    orcid: https://orcid.org/0000-0002-5910-4934
  - family-names: Lønning
    given-names: Per Eystein
  - family-names: Knappskog
    given-names: Stian
  journal: Bioinformatics
  year: '2021'
  url: https://doi.org/10.1093/bioinformatics/btab586
repository: https://bioc.r-universe.dev
repository-code: https://github.com/BBCG/ramr
url: https://github.com/BBCG/ramr
contact:
- family-names: Nikolaienko
  given-names: Oleksii
  email: oleksii.nikolaienko@gmail.com
  orcid: https://orcid.org/0000-0002-5910-4934