To cite rTRM in publications use:

Diego Diez, Diego Miranda-Saavedra. rTRMui: an R-based local web interface for the prediction of transcriptional regulatory modules. 2013, submitted

Corresponding BibTeX entry:

  @Article{,
    title = {rTRMui: an R-based local web interface for the prediction
      of transcriptional regulatory modules},
    author = {{Diego Diez} and {Diego Miranda-Saavedra}},
    year = {2013, submitted},
    journal = {Journal},
  }