Changes in version 1.3.2 (2020-11-24) o baseMatrix error fix Changes in version 0.99.12 (2020-02-08) o 2000+ sequences multifasta error removed Changes in version 0.99.7 (2020-01-21) o Warning removed Changes in version 0.99.6 (2020-01-21) o Error removed Changes in version 0.99.5 (2020-01-21) o An even bigger FASTA has been used in the "Quick Start" section Changes in version 0.99.4 (2020-01-21) o The package no longer relies on seqinr, now operates only with Biostrings functions and variables o The Title and the Description have been updated to be more precise in describing the package. o Despcritional comments have been added to all codes. o The sWeeP functions now accept AAStringset as well file names as a valid entry o The sWeeP function now uses an S4 Generic and S4 methods o The user input variable baseMatrix has now a validating step on the code o The sWeeP function now uses Biostrings::readAAStringSet for FASTA input. o All functions now only use message(...) to communicate with users. o All 1:length(...) instances have been replaced with seq_len o On all codes, the function tidy_source() from the formatR package has been used to standardizing code formating. o All operations that do not affect have to the package working been removed. o Some functions and variables naming has been changed aiming to follow the lowerCamelCase convention (the sWeeP function still as it's, due it is the method initials) o aa2int() has been replaced by a vector inside the aa2num2() o The data set datastring has been removed. o fas2mat receives now an AAStringSet as entry o Instead of reading the R object datastring and writing it as a FASTA file, a FASTA file has been included directly in inst/extdata/ o A bigger FASTA has been used in the "Quick Start" section o All non-R package source files have been removed Changes in version 0.99.0 (2019-05-15) o Submitted to Bioconductor