# -------------------------------------------- # CITATION file created with {cffr} R package # See also: https://docs.ropensci.org/cffr/ # -------------------------------------------- cff-version: 1.2.0 message: 'To cite package "quantiseqr" in publications use:' type: software license: GPL-3.0-only title: 'quantiseqr: Quantification of the Tumor Immune contexture from RNA-seq data' version: 1.13.0 abstract: This package provides a streamlined workflow for the quanTIseq method, developed to perform the quantification of the Tumor Immune contexture from RNA-seq data. The quantification is performed against the TIL10 signature (dissecting the contributions of ten immune cell types), carefully crafted from a collection of human RNA-seq samples. The TIL10 signature has been extensively validated using simulated, flow cytometry, and immunohistochemistry data. authors: - family-names: Marini given-names: Federico email: marinif@uni-mainz.de orcid: https://orcid.org/0000-0003-3252-7758 - family-names: Finotello given-names: Francesca email: francesca.finotello@i-med.ac.at orcid: https://orcid.org/0000-0003-0712-4658 repository: https://bioc.r-universe.dev contact: - family-names: Marini given-names: Federico email: marinif@uni-mainz.de orcid: https://orcid.org/0000-0003-3252-7758