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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "qsvaR" in publications use:'
type: software
license: Artistic-2.0
title: 'qsvaR: Generate Quality Surrogate Variable Analysis for Degradation Correction'
version: 1.9.0
doi: 10.18129/B9.bioc.qsvaR
identifiers:
- type: doi
  value: 10.32614/CRAN.package.qsvaR
abstract: The qsvaR package contains functions for removing the effect of degration
  in rna-seq data from postmortem brain tissue. The package is equipped to help users
  generate principal components associated with degradation. The components can be
  used in differential expression analysis to remove the effects of degradation.
authors:
- family-names: Stolz
  given-names: Joshua
  email: jstolz80@gmail.com
  orcid: https://orcid.org/0000-0001-5694-5247
- family-names: Tnani
  given-names: Hedia
  email: hediatnani0@gmail.com
  orcid: https://orcid.org/0000-0002-0380-9740
preferred-citation:
  type: manual
  title: qsvaR
  authors:
  - family-names: Stolz
    given-names: Joshua M.
  - family-names: Tnani
    given-names: Hedia
    email: hediatnani0@gmail.com
    orcid: https://orcid.org/0000-0002-0380-9740
  - family-names: Collado-Torres
    given-names: Leonardo
  year: '2024'
  url: http://www.bioconductor.org/packages/qsvaR
  notes: https://github.com/LieberInstitute/qsvaR/qsvaR - R package version 1.9.0
  doi: 10.18129/B9.bioc.qsvaR
repository: https://bioc.r-universe.dev
repository-code: https://github.com/LieberInstitute/qsvaR
commit: f11bbe558a065dfb74e95d19735b6916751c1a4d
url: https://support.bioconductor.org/t/qsvaR
date-released: '2024-05-03'
contact:
- family-names: Tnani
  given-names: Hedia
  email: hediatnani0@gmail.com
  orcid: https://orcid.org/0000-0002-0380-9740
references:
- type: article
  title: qsvaR
  authors:
  - family-names: Stolz
    given-names: Joshua M.
  - family-names: Tnani
    given-names: Hedia
  - family-names: Tao
    given-names: Ran
  - family-names: Jaffe
    given-names: Andrew E.
  - family-names: Collado-Torres
    given-names: Leonardo
  year: '2024'
  journal: bioRxiv
  doi: 10.1101/TODO
  url: https://www.biorxiv.org/content/10.1101/TODO