To cite package ‘qPLEXanalyzer’ in publications use:

  Papachristou et al. (2018): A quantitative mass spectrometry-based
  approach to monitor the dynamics of endogenous chromatin-associated
  protein complexes. Nature Communications

A BibTeX entry for LaTeX users is

  @Article{,
    title = {A quantitative mass spectrometry-based approach to monitor the dynamics of endogenous chromatin-associated protein complexes.},
    author = {Evangelia K. Papachristou and Kamal Kishore and Andrew N. Holding and Kate Harvey and Theodoros I. Roumeliotis and Chandra Sekhar Reddy Chilamakuri and Soleilmane Omarjee and Kee Ming Chia and Alex Swarbrick and Elgene Lim and Florian Markowetz and Matthew Eldridge and Rasmus Siersbaek and Clive S. D'Santos and Jason S. Carroll},
    year = {2018},
    journal = {Nature Communications},
    doi = {10.1038/s41467-018-04619-5},
  }