Package: qPLEXanalyzer
Type: Package
Title: Tools for quantitative proteomics data analysis
Version: 1.31.0
Date: 2026-01-28
Authors@R: c(person("Matthew","Eldridge", role = "aut"),
             person("Kamal", "Kishore", role = "aut", 
                    email = "kamal.fartiyal84@gmail.com"),
             person("Ashley", "Sawle", role=c("aut", "cre"),
                     email="ads2202cu@gmail.com"))
Description: Tools for TMT based quantitative proteomics data analysis.
License: GPL-2
Imports: assertthat, BiocGenerics, Biostrings, dplyr (>= 1.0.0),
        ggdendro, ggplot2, graphics, grDevices, IRanges, limma,
        magrittr, MSnbase, preprocessCore, purrr, RColorBrewer, readr,
        rlang, scales, stats, stringr, tibble, tidyr, tidyselect, utils
Depends: R (>= 4.0), Biobase, MSnbase
Suggests: patchwork, knitr, MSnbase, qPLEXdata, rmarkdown, statmod,
        testthat, UniProt.ws, vdiffr
VignetteBuilder: knitr
biocViews: ImmunoOncology, Proteomics, MassSpectrometry, Normalization,
        Preprocessing, QualityControl, DataImport
BugReports: https://github.com/crukci-bioinformatics/qPLEXanalyzer/issues
Encoding: UTF-8
RoxygenNote: 7.3.3
Config/pak/sysreqs: cmake libglpk-dev make libicu-dev libuv1-dev
        libxml2-dev libnetcdf-dev libssl-dev libx11-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:48:15 UTC
RemoteUrl: https://github.com/bioc/qPLEXanalyzer
RemoteRef: HEAD
RemoteSha: cc7b6461160740f6f2723cb236588688d2a01444
NeedsCompilation: no
Packaged: 2026-05-30 09:40:12 UTC; root
Author: Matthew Eldridge [aut],
  Kamal Kishore [aut],
  Ashley Sawle [aut, cre]
Maintainer: Ashley Sawle <ads2202cu@gmail.com>