Package: pvca
Type: Package
Title: Principal Variance Component Analysis (PVCA)
Version: 1.53.0
Date: 2013-09-25
Author: Pierre Bushel <bushel@niehs.nih.gov>
Maintainer: Jianying LI <li11@niehs.nih.gov>
Description: This package contains the function to assess the batch
        sourcs by fitting all "sources" as random effects including
        two-way interaction terms in the Mixed Model(depends on lme4
        package) to selected principal components, which were obtained
        from the original data correlation matrix. This package
        accompanies the book "Batch Effects and Noise in Microarray
        Experiements, chapter 12.
Depends: R (>= 2.15.1)
Imports: Matrix, Biobase, vsn, stats, lme4
Suggests: golubEsets
License: LGPL (>= 2.0)
LazyLoad: yes
Packaged: 2026-07-04 23:29:08 UTC; root
biocViews: Microarray, BatchEffect
Config/pak/sysreqs: cmake make zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:37:05 UTC
RemoteUrl: https://github.com/bioc/pvca
RemoteRef: HEAD
RemoteSha: 4399c6ea71e9ee0d404a383b589209772a55d2a0
NeedsCompilation: no