NEWS
proActiv 1.3.3
- plotPromoters is deprecated
- Implemented three new functions
- plotPCA: performs principal component analysis
- plotHeatmap: heatmap visualization
- integrateProactiv: integrate different proActiv runs
proActiv 1.1.22
- Update package-down site
- Update NEWS for Bioconductor 3.13
proActiv 1.1.18
- Gene expression data is now stored in the assays of the summarizedExperiment
object returned by proActiv to facilitate easier filtering of the
summarizedExperiment object. The metadata slot is now empty.
- Plotting promoter activity: Implementation of boxplotPromoters function to
plot boxplots of absolute promoter activity, relative promoter activity, and
gene expression.
- Identification of alternative promoters: Implementation of
getAlternativePromoters, used to identify promoters that may exhibit alternative
usage.
proActiv 1.1.15
- Implement getAlternativePromoters for identifying alternative promoters
- Implement boxplotPromoters for visualizing promoter usage
proActiv 1.1.6
- Enforce condition vector to following naming conventions
proActiv 1.0.0
- Released with Bioconductor 3.12
proActiv 0.99.0
- Submitted to Bioconductor