NEWS

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preciseTAD 1.5.0 (2022-04-21)

• Match NEWS and DESCRIPTION versioning

preciseTAD 1.3.3 (2021-09-28)

• The default for MinPts DBSCAN parameter has been changed to 100

preciseTAD 1.3.2 (2021-09-21)

• Vignette edits

preciseTAD 1.3.1 (2021-07-19)

• Change y of x.y.z version number to comply with the release
• Add MD as a maintainer

preciseTAD 1.1.4 (2021-06-16)

• preciseTAD function rewritten
• genome version (hg19/hg38) is now supported via rCGH
• if no PTBRs found, return NULL without error
• MinPts and eps DBSCAN parameters are now tested on a grid, instead of threshold t and eps
• flank argument renamed to slope
• savetobed argument added for auto-saving PTBRs/PTBPs in BED files
• help expanded, defaults added

preciseTAD 1.1.3 (2021-05-29)

• extractBoundaries function rewritten
• preprocess argument is renamed to filter
• natural sort of chromosome names is performed using gtools::mixedsort
• help expanded

preciseTAD 0.99.6 (2020-08-30)

• Major simplification of the preciseTAD function, many arguments are kept default
• Major vignette rewrite
• Add pkgdown web site
• Update DESCRIPTION o Package description
• Start tracking NEWS

preciseTAD 0.99.4 (2020-07-14)

• Preparing for release

preciseTAD 0.99.0 (2020-06-16)

• Initial version