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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "prebs" in publications use:'
type: software
license: Artistic-2.0
title: 'prebs: Probe region expression estimation for RNA-seq data for improved microarray
  comparability'
version: 1.45.0
doi: 10.1371/journal.pone.0126545
abstract: The prebs package aims at making RNA-sequencing (RNA-seq) data more comparable
  to microarray data. The comparability is achieved by summarizing sequencing-based
  expressions of probe regions using a modified version of RMA algorithm. The pipeline
  takes mapped reads in BAM format as an input and produces either gene expressions
  or original microarray probe set expressions as an output.
authors:
- family-names: Uziela
  given-names: Karolis
  email: karolis.uziela@scilifelab.se
- family-names: Honkela
  given-names: Antti
preferred-citation:
  type: article
  title: Probe region expression estimation for RNA-seq data for improved microarray
    comparability
  authors:
  - family-names: Uziela
    given-names: Karolis
    email: karolis.uziela@scilifelab.se
  - family-names: Honkela
    given-names: Antti
  journal: PLoS ONE
  volume: '10'
  issue: '5'
  year: '2015'
  doi: 10.1371/journal.pone.0126545
  url: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0126545
  start: e0126545
repository: https://bioc.r-universe.dev
contact:
- family-names: Uziela
  given-names: Karolis
  email: karolis.uziela@scilifelab.se