Changes in version 1.41.1                        

    o   updated DESCRIPTION file to new format (Authors@R)

                       Changes in version 1.35.1                        

    o   changed e-mail address of maintainer

    o   updated README.md and formatting of package vignette

    o   updated CITATION

    o   updated references in documentation

                       Changes in version 1.31.1                        

    o   changed arguments in qqplot() method for compatibility with new version of
	the standard function in the 'stats' package (added dummy arguments to
	avoid errors)

    o   minor adaptations of help pages

                       Changes in version 1.25.1                        

    o   adjusted NAMESPACE to account for changes in BiocGenerics package

                       Changes in version 1.23.2                        

    o   updates and documentation to vignette in order to adapt to newer version of
	Illumina's TruSeq DNA Exome library prep kit

    o   changed default col.names in readRegionsFromBedFile(); corresponding update of
	help page

                       Changes in version 1.23.1                        

    o   re-created genome data objects (old data objects had become incompatible
	with newer 'BSgenome' version)

                       Changes in version 1.19.1                        

    o   fix in nullModel() method to ensure compatibility with R 4.0

                       Changes in version 1.17.3                        

    o   removed change history from package vignette for easier maintenance

                       Changes in version 1.17.2                        

    o   minor changes to DESCRIPTION file (system requirement GNU make) and src/Makevars

                       Changes in version 1.17.1                        

    o   changed summary() method for VariantAnnotation class in order to stay
	compatible with print() method in GenomicRanges package

    o   corresponding minor adaptations in documentation and package vignette

                       Changes in version 1.15.1                        

    o   changed Rsamtools API to Rhtslib API

                        Changes in version 1.5.4                        

    o   fix in vignette code that became necessary because of a change in
	the hg38 transcript annotation

                        Changes in version 1.5.3                        

    o   readRegionsFromBedFile() now allows for including metadata columns

    o   corresponding changes in documentation

    o   fix of call to method rowRanges() into suggested package

    o   fix of citation info file

    o   fix of inst/NEWS

                        Changes in version 1.5.2                        

    o   version number bump for technical reasons related to Bioconductor
	build servers

                        Changes in version 1.5.1                        

    o   version number bump for technical reasons related to Bioconductor
	build servers

                        Changes in version 1.3.1                        

    o   added missing method readVariantInfo() for signature
	'character', 'GRanges'

    o   minor streamlining of source code of readGenotypeMatrix()

    o   corrections of namespace imports

                        Changes in version 1.1.3                        

    o   further fix of weights() method for signature 'AssocTestResultRanges'

                        Changes in version 1.1.2                        

    o   fix of weights() method for signature 'AssocTestResultRanges'

                        Changes in version 1.1.1                        

    o   fix of filterResults() method for signature 'GRanges'

                        Changes in version 1.0.0                        

    o   first official release as part of Bioconductor 3.1