NEWS

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pmp 1.15.1

• fix plots due to breaking changes in ggplot2

pmp 1.3.4

• Added option to constrain spar values for QCRSC.

pmp 1.3.2

• Added inputs/outputs for pqn.
• Fixed glog plot bug.

pmp 1.2.1

• Account for missing injections in QCRSC.

pmp 0.99.6

• Updated vignettes.

pmp 0.99.2

• Support for SummarizedExperiment class.
• Updated documentation and vignette.
• Added functions for QCRSC algorithm of signal-batch correction for MS data.

pmp 0.2.6

• glog transformation can use fixed lambda value input.
• Plot to visualise output of glog lambda value optimisation.

pmp 0.2.5

• Pre-calculated mean reference values can be used with PQN normalisation function.

pmp 0.2.4 (2019-08-07)

• Updated documetation and usage examples.
• Refactored glog scaling function.
• PQN normalisation supports using all samples to calculate correction factor.