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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "planttfhunter" in publications use:'
type: software
license: GPL-3.0-only
title: 'planttfhunter: Identification and classification of plant transcription factors'
version: 1.5.0
abstract: planttfhunter is used to identify plant transcription factors (TFs) from
  protein sequence data and classify them into families and subfamilies using the
  classification scheme implemented in PlantTFDB. TFs are identified using pre-built
  hidden Markov model profiles for DNA-binding domains. Then, auxiliary and forbidden
  domains are used with DNA-binding domains to classify TFs into families and subfamilies
  (when applicable). Currently, TFs can be classified in 58 different TF families/subfamilies.
authors:
- family-names: Almeida-Silva
  given-names: Fabrício
  email: fabricio_almeidasilva@hotmail.com
  orcid: https://orcid.org/0000-0002-5314-2964
- family-names: Peer
  given-names: Yves
  name-particle: Van de
  email: yves.vandepeer@psb.vib-ugent.be
  orcid: https://orcid.org/0000-0003-4327-3730
repository: https://bioc.r-universe.dev
repository-code: https://github.com/almeidasilvaf/planttfhunter
url: https://support.bioconductor.org/t/planttfhunter
date-released: '2022-03-10'
contact:
- family-names: Almeida-Silva
  given-names: Fabrício
  email: fabricio_almeidasilva@hotmail.com
  orcid: https://orcid.org/0000-0002-5314-2964