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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "philr" in publications use:'
type: software
license: GPL-3.0-only
title: 'philr: Phylogenetic partitioning based ILR transform for metagenomics data'
version: 1.31.0
doi: 10.7554/eLife.21887
abstract: PhILR is short for Phylogenetic Isometric Log-Ratio Transform. This package
  provides functions for the analysis of compositional data (e.g., data representing
  proportions of different variables/parts). Specifically this package allows analysis
  of compositional data where the parts can be related through a phylogenetic tree
  (as is common in microbiota survey data) and makes available the Isometric Log Ratio
  transform built from the phylogenetic tree and utilizing a weighted reference measure.
authors:
- family-names: Silverman
  given-names: Justin
  email: jsilve24@gmail.com
preferred-citation:
  type: article
  title: A phylogenetic transform enhances analysis of compositional microbiota data
  authors:
  - family-names: Silverman
    given-names: Justin D
  - family-names: Washburne
    given-names: Alex D
  - family-names: Mukherjee
    given-names: Sayan
  - family-names: David
    given-names: Lawrence A
  year: '2017'
  journal: eLife
  volume: '6'
  doi: 10.7554/eLife.21887
  url: https://elifesciences.org/content/6/e21887
repository: https://bioc.r-universe.dev
repository-code: https://github.com/jsilve24/philr
url: https://github.com/jsilve24/philr
date-released: '2023-03-27'
contact:
- family-names: Silverman
  given-names: Justin
  email: jsilve24@gmail.com