Package: phantasusLite
Type: Package
Title: Loading and annotation RNA-seq counts matrices
Version: 1.11.4
Authors@R: c(person("Rita", "Sablina", role = "aut"),        
             person("Maxim", "Kleverov", role = "aut"),        
             person("Alexey", "Sergushichev", email = "alsergbox@gmail.com", role = c("aut", "cre")))
Description: PhantasusLite – a lightweight package with helper
        functions of general interest extracted from phantasus package.
        In parituclar it simplifies working with public RNA-seq
        datasets from GEO by providing access to the remote HSDS
        repository with the precomputed gene counts from ARCHS4 and
        DEE2 projects.
Depends: R (>= 4.2)
Imports: data.table, rhdf5client(>= 1.25.1), httr, stringr, stats,
        utils, Biobase, methods
biocViews: GeneExpression, Transcriptomics, RNASeq
License: MIT + file LICENSE
Encoding: UTF-8
Suggests: testthat (>= 3.0.0), knitr, rmarkdown, BiocStyle, rhdf5,
        GEOquery (>= 2.81.21)
VignetteBuilder: knitr
Config/testthat/edition: 3
URL: https://github.com/alserglab/phantasusLite/
BugReports: https://github.com/alserglab/phantasusLite/issues
Config/roxygen2/version: 8.0.0
Config/pak/sysreqs: libicu-dev libssl-dev zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-06-23 22:31:56 UTC
RemoteUrl: https://github.com/bioc/phantasusLite
RemoteRef: HEAD
RemoteSha: 6c4a67c9b2a078553e34c40b1292f7b75e22097e
NeedsCompilation: no
Packaged: 2026-06-24 06:49:04 UTC; root
Author: Rita Sablina [aut],
  Maxim Kleverov [aut],
  Alexey Sergushichev [aut, cre]
Maintainer: Alexey Sergushichev <alsergbox@gmail.com>