Package: panp
Version: 1.83.0
Title: Presence-Absence Calls from Negative Strand Matching Probesets
Author: Peter Warren
Description: A function to make gene presence/absence calls based on
        distance from negative strand matching probesets (NSMP) which
        are derived from Affymetrix annotation. PANP is applied after
        gene expression values are created, and therefore can be used
        after any preprocessing method such as MAS5 or GCRMA, or
        PM-only methods like RMA. NSMP sets have been established for
        the HGU133A and HGU133-Plus-2.0 chipsets to date.
Maintainer: Peter Warren <peter.warren@verizon.net>
Depends: R (>= 2.10), affy (>= 1.23.4), Biobase (>= 2.5.5)
Imports: Biobase, methods, stats, utils
Suggests: gcrma
License: GPL (>= 2)
biocViews: Infrastructure
Config/pak/sysreqs: zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:31:29 UTC
RemoteUrl: https://github.com/bioc/panp
RemoteRef: HEAD
RemoteSha: ff4c58cac6005e1910800df646db119c75068c46
NeedsCompilation: no
Packaged: 2026-05-30 07:14:47 UTC; root