To cite package ‘pairedGSEA’ in publications use:

  Dam, S.H., Olsen, L.R., Vitting-Seerup, K. Expression and Splicing
  Mediate Distinct Biological Signals BMC Biology (2023)

A BibTeX entry for LaTeX users is

  @Article{,
    title = {Expression and Splicing Mediate Distinct Biological Signals},
    author = {Søren Helweg Dam and Lars Rønn Olsen and Kristoffer Vitting-Seerup},
    year = {2023},
    journal = {BMC Biology},
    doi = {10.1186/s12915-023-01724-w},
  }